Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug abc transporter atp-binding protein | C0Z19_12305 | Not Available | Negative | 2692335 - 2693270 | 34328.6 |
| iclr family transcriptional regulator | C0Z19_12310 | Not Available | Positive | 2693808 - 2694644 | 29988.0 |
| multidrug transporter subunit mdta | C0Z19_12315 | Not Available | Positive | 2694887 - 2696275 | 48273.3 |
| multidrug transporter subunit mdtb | C0Z19_12320 | Not Available | Positive | 2696300 - 2699428 | 111063.0 |
| nodulation protein | C0Z19_12325 | Not Available | Positive | 2699481 - 2702777 | 116805.0 |
| hypothetical protein | C0Z19_12330 | Not Available | Positive | 2702902 - 2703285 | 13936.3 |
| hypothetical protein | C0Z19_12335 | Not Available | Positive | 2703291 - 2703806 | 17242.6 |
| peroxiredoxin | C0Z19_12340 | Not Available | Negative | 2703818 - 2704381 | 20428.2 |
| diguanylate phosphodiesterase | C0Z19_12345 | Not Available | Negative | 2704508 - 2705818 | 47402.4 |
| diguanylate cyclase | C0Z19_12350 | Not Available | Positive | 2706094 - 2707926 | 66521.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
