Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | C0Z19_12200 | Not Available | Positive | 2669811 - 2670650 | 30515.6 |
| coa ester lyase | C0Z19_12210 | Not Available | Positive | 2671587 - 2672441 | 30667.6 |
| carnitine dehydratase | C0Z19_12215 | Not Available | Negative | 2672547 - 2674025 | 53763.7 |
| aldehyde dehydrogenase | C0Z19_12220 | Not Available | Negative | 2674151 - 2674744 | 20794.0 |
| phosphonopyruvate decarboxylase | C0Z19_12225 | Not Available | Negative | 2674744 - 2675280 | 19267.1 |
| lysr family transcriptional regulator | C0Z19_12230 | Not Available | Positive | 2675398 - 2676330 | 33731.2 |
| abc transporter atp-binding protein | C0Z19_12235 | Not Available | Negative | 2676395 - 2676744 | 12654.6 |
| exodeoxyribonuclease v subunit beta | C0Z19_12240 | Not Available | Negative | 2676745 - 2678236 | 54689.0 |
| exodeoxyribonuclease v subunit gamma | C0Z19_12245 | Not Available | Negative | 2678041 - 2681541 | 126848.0 |
| hypothetical protein | C0Z19_12250 | Not Available | Positive | 2681759 - 2684032 | 85128.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
