Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | C0Z19_12150 | Not Available | Positive | 2660983 - 2661459 | 17485.2 |
| hypothetical protein | C0Z19_12155 | Not Available | Positive | 2661482 - 2661916 | 15618.3 |
| hypothetical protein | C0Z19_12160 | Not Available | Negative | 2662028 - 2662147 | 4673.65 |
| lysr family transcriptional regulator | C0Z19_12165 | Not Available | Negative | 2662324 - 2663220 | 32253.8 |
| diguanylate cyclase | C0Z19_12170 | Not Available | Positive | 2663324 - 2663995 | 23041.3 |
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | C0Z19_12175 | Not Available | Positive | 2664020 - 2664667 | 22428.2 |
| mfs transporter | C0Z19_12180 | Not Available | Positive | 2664776 - 2666062 | 46341.3 |
| lysr family transcriptional regulator | C0Z19_12185 | Not Available | Negative | 2666154 - 2667107 | 34072.5 |
| acyl-coa dehydrogenase | C0Z19_12190 | Not Available | Positive | 2667359 - 2668519 | 42829.2 |
| coa transferase | C0Z19_12195 | Not Available | Positive | 2668536 - 2669714 | 43263.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
