Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ring-cleaving dioxygenase | C0Z19_12040 | Not Available | Positive | 2634633 - 2635196 | 21302.5 |
| aldehyde dehydrogenase family protein | C0Z19_12045 | Not Available | Positive | 2635300 - 2636739 | 51436.3 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | C0Z19_12050 | Not Available | Positive | 2636823 - 2638436 | 58837.4 |
| gntr family transcriptional regulator | C0Z19_12055 | Not Available | Positive | 2638580 - 2639275 | 25931.8 |
| porin | C0Z19_12060 | Not Available | Negative | 2639375 - 2640478 | 38815.6 |
| short-chain dehydrogenase/reductase | C0Z19_12065 | Not Available | Negative | 2641079 - 2641885 | 28821.9 |
| mfs transporter | C0Z19_12070 | Not Available | Negative | 2641919 - 2645059 | 114266.0 |
| efflux rnd transporter periplasmic adaptor subunit | C0Z19_12075 | Not Available | Negative | 2645056 - 2646171 | 38592.0 |
| tetr family transcriptional regulator | C0Z19_12080 | Not Available | Negative | 2646253 - 2646870 | 23204.6 |
| rnd transporter | C0Z19_12085 | Not Available | Positive | 2646948 - 2648408 | 51303.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
