Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-terminal binding protein | C0Z19_11940 | Not Available | Positive | 2615608 - 2616570 | 33865.9 |
| aminoglycoside phosphotransferase | C0Z19_11945 | Not Available | Positive | 2616611 - 2617642 | 37789.3 |
| chemotaxis protein | C0Z19_11950 | Not Available | Positive | 2617698 - 2619266 | 55563.5 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | C0Z19_11955 | Not Available | Negative | 2619376 - 2620125 | 26813.4 |
| cupin | C0Z19_11960 | Not Available | Positive | 2620342 - 2620917 | 20507.3 |
| phosphopyruvate hydratase | C0Z19_11965 | Not Available | Positive | 2621030 - 2622340 | 45920.1 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | C0Z19_11970 | Not Available | Positive | 2622410 - 2623417 | 38073.3 |
| carboxymuconolactone decarboxylase family protein | C0Z19_11975 | Not Available | Positive | 2623441 - 2623974 | 19737.5 |
| alcohol dehydrogenase | C0Z19_11980 | Not Available | Positive | 2624072 - 2625181 | 39522.7 |
| hypothetical protein | C0Z19_11985 | Not Available | Positive | 2625497 - 2625841 | 11936.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
