Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath small subunit | C0Z19_11675 | Not Available | Positive | 2556993 - 2559023 | 74339.7 |
| hcp1 family type vi secretion system effector | C0Z19_11680 | Not Available | Positive | 2559054 - 2559611 | 20222.1 |
| type vi secretion system baseplate subunit tsse | C0Z19_11685 | Not Available | Positive | 2559671 - 2560048 | 14138.9 |
| type vi secretion system baseplate subunit tssf | C0Z19_11690 | Not Available | Positive | 2560056 - 2561894 | 68425.5 |
| type vi secretion system baseplate subunit tssg | C0Z19_11695 | Not Available | Positive | 2561858 - 2562985 | 41677.0 |
| type iv secretion protein rhs | C0Z19_11700 | Not Available | Positive | 2562982 - 2565651 | 94751.4 |
| hypothetical protein | C0Z19_11705 | Not Available | Positive | 2565658 - 2568300 | 95677.9 |
| hypothetical protein | C0Z19_11710 | Not Available | Positive | 2568297 - 2569364 | 39487.3 |
| hypothetical protein | C0Z19_11715 | Not Available | Positive | 2569364 - 2569918 | 20179.6 |
| hypothetical protein | C0Z19_11720 | Not Available | Positive | 2569959 - 2570357 | 13798.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
