Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate abc transporter atp-binding protein | C0Z19_11565 | Not Available | Negative | 2534175 - 2534957 | 29465.7 |
| abc transporter permease | C0Z19_11570 | Not Available | Negative | 2534994 - 2535821 | 30483.4 |
| hypothetical protein | C0Z19_11575 | Not Available | Negative | 2535889 - 2537184 | 48377.9 |
| carboxylase | C0Z19_11580 | Not Available | Negative | 2537274 - 2538752 | 54129.9 |
| acetyl-coa carboxylase biotin carboxylase subunit | C0Z19_11585 | Not Available | Negative | 2538749 - 2540116 | 49736.5 |
| hypothetical protein | C0Z19_11590 | Not Available | Negative | 2540171 - 2540761 | 20588.6 |
| 3-keto-5-aminohexanoate cleavage protein | C0Z19_11595 | Not Available | Positive | 2540959 - 2541792 | 30234.4 |
| iclr family transcriptional regulator | C0Z19_11600 | Not Available | Positive | 2542060 - 2542911 | 30975.3 |
| tetr family transcriptional regulator | C0Z19_11610 | Not Available | Negative | 2543188 - 2543880 | 23989.2 |
| sdr family oxidoreductase | C0Z19_11615 | Not Available | Positive | 2544070 - 2544858 | 27613.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
