Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit l | C0Z19_11455 | Not Available | Positive | 2512356 - 2513942 | 56543.1 |
| duf2309 domain-containing protein | C0Z19_11460 | Not Available | Positive | 2513964 - 2516537 | 94182.9 |
| phosphonate transporter | C0Z19_11465 | Not Available | Positive | 2516800 - 2517180 | 14265.3 |
| sensor domain-containing diguanylate cyclase | C0Z19_11470 | Not Available | Positive | 2517177 - 2518508 | 48803.3 |
| diguanylate phosphodiesterase | C0Z19_11475 | Not Available | Positive | 2518569 - 2519354 | 29044.0 |
| sugar dehydrogenase | C0Z19_11480 | Not Available | Negative | 2519450 - 2520229 | 27744.3 |
| hypothetical protein | C0Z19_11490 | Not Available | Positive | 2521310 - 2522437 | 39376.9 |
| hypothetical protein | C0Z19_11495 | Not Available | Negative | 2522480 - 2523442 | 35668.5 |
| csbd family protein | C0Z19_11500 | Not Available | Negative | 2523466 - 2523654 | 6640.98 |
| photosystem reaction center subunit h | C0Z19_11505 | Not Available | Negative | 2523802 - 2524224 | 14702.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
