Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | C0Z19_11205 | Not Available | Positive | 2459081 - 2460103 | 35635.0 |
| multidrug transporter acrb | C0Z19_11210 | Not Available | Positive | 2460126 - 2463377 | 116228.0 |
| duf2892 domain-containing protein | C0Z19_11215 | Not Available | Positive | 2463374 - 2463583 | 7538.51 |
| porin | C0Z19_11220 | Not Available | Positive | 2463621 - 2465003 | 48216.4 |
| pyridine nucleotide-disulfide oxidoreductase | C0Z19_11225 | Not Available | Positive | 2465088 - 2466359 | 46835.4 |
| lysr family transcriptional regulator | C0Z19_11230 | Not Available | Negative | 2466442 - 2467404 | 35363.6 |
| oxidoreductase | C0Z19_11235 | Not Available | Positive | 2467541 - 2468314 | 26755.0 |
| aldo/keto reductase | C0Z19_11240 | Not Available | Positive | 2468328 - 2469314 | 35883.8 |
| hypothetical protein | C0Z19_11245 | Not Available | Positive | 2469406 - 2469876 | 17245.9 |
| abc transporter | C0Z19_11250 | Not Available | Positive | 2470091 - 2470795 | 25360.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
