Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| benzoyl-coa-dihydrodiol lyase | C0Z19_11105 | Not Available | Negative | 2438003 - 2439670 | 61396.0 |
| shikimate kinase | C0Z19_11110 | Not Available | Negative | 2439807 - 2440769 | 35187.3 |
| duf4863 domain-containing protein | C0Z19_11115 | Not Available | Positive | 2440962 - 2441435 | 17064.2 |
| 3,4-dehydroadipyl-coa semialdehyde dehydrogenase | C0Z19_11120 | Not Available | Positive | 2441469 - 2443064 | 55648.1 |
| benzoate-coa ligase family protein | C0Z19_11125 | Not Available | Positive | 2443173 - 2444792 | 58312.9 |
| alpha/beta hydrolase | C0Z19_11130 | Not Available | Positive | 2444801 - 2445640 | 31078.0 |
| undecaprenyl-diphosphatase | C0Z19_11135 | Not Available | Positive | 2445833 - 2446462 | 22866.6 |
| rnd transporter | C0Z19_11140 | Not Available | Negative | 2446500 - 2446847 | 12082.8 |
| copper oxidase | C0Z19_11145 | Not Available | Negative | 2446914 - 2448209 | 47562.5 |
| rnd transporter | C0Z19_11150 | Not Available | Negative | 2448211 - 2449698 | 53632.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
