Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit ii | C0Z19_10855 | Not Available | Positive | 2382818 - 2384164 | 47936.7 |
| cytochrome c oxidase subunit i | C0Z19_10860 | Not Available | Positive | 2384199 - 2385809 | 59603.5 |
| cytochrome c oxidase assembly protein | C0Z19_10865 | Not Available | Positive | 2385937 - 2386068 | 4779.0 |
| cytochrome c oxidase assembly protein | C0Z19_10870 | Not Available | Positive | 2386102 - 2386734 | 23031.7 |
| hypothetical protein | C0Z19_10875 | Not Available | Positive | 2386781 - 2386975 | 6876.5 |
| cytochrome c oxidase subunit 3 | C0Z19_10880 | Not Available | Positive | 2387097 - 2387954 | 32286.2 |
| duf2909 domain-containing protein | C0Z19_10885 | Not Available | Negative | 2388189 - 2388398 | 7951.14 |
| hypothetical protein | C0Z19_10890 | Not Available | Positive | 2388564 - 2389286 | 26523.0 |
| cytochrome c oxidase subunit i | C0Z19_10895 | Not Available | Positive | 2389300 - 2389956 | 23934.8 |
| heme a synthase | C0Z19_10900 | Not Available | Positive | 2390023 - 2391132 | 39731.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
