Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | C0Z19_10500 | Not Available | Negative | 2309503 - 2310636 | 40136.9 |
| short chain dehydrogenase | C0Z19_10505 | Not Available | Negative | 2310732 - 2311409 | 23893.7 |
| acetyl-coa c-acyltransferase | C0Z19_10510 | Not Available | Negative | 2311517 - 2312722 | 41643.4 |
| carbonate dehydratase | C0Z19_10515 | Not Available | Negative | 2312715 - 2313479 | 28050.5 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | C0Z19_10520 | Not Available | Negative | 2313549 - 2315408 | 71231.0 |
| merr family transcriptional regulator | C0Z19_10525 | Not Available | Negative | 2315405 - 2315860 | 17096.1 |
| zn-dependent hydrolase | C0Z19_10530 | Not Available | Positive | 2316067 - 2317164 | 40710.8 |
| peptidase | C0Z19_10535 | Not Available | Negative | 2317154 - 2318638 | 51393.3 |
| rna polymerase subunit sigma-24 | C0Z19_10540 | Not Available | Negative | 2318780 - 2320048 | 46057.5 |
| dehydrogenase | C0Z19_10545 | Not Available | Negative | 2320052 - 2320465 | 15514.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
