Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylglutaryl-coa lyase | C0Z19_10450 | Not Available | Negative | 2299636 - 2300559 | 31967.4 |
| glyoxylate/hydroxypyruvate reductase a | C0Z19_10455 | Not Available | Negative | 2300660 - 2301625 | 34855.3 |
| hypothetical protein | C0Z19_10460 | Not Available | Positive | 2301851 - 2302276 | 15680.1 |
| biotin synthase biob | C0Z19_10465 | Not Available | Negative | 2302330 - 2303376 | 38504.8 |
| dethiobiotin synthase | C0Z19_10470 | Not Available | Negative | 2303438 - 2304160 | 25362.7 |
| 8-amino-7-oxononanoate synthase | C0Z19_10475 | Not Available | Negative | 2304157 - 2305338 | 41521.6 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | C0Z19_10480 | Not Available | Negative | 2305338 - 2306705 | 49824.3 |
| hypothetical protein | C0Z19_10485 | Not Available | Positive | 2306927 - 2307115 | 6969.1 |
| hypothetical protein | C0Z19_10490 | Not Available | Negative | 2307313 - 2308554 | 44645.9 |
| hypothetical protein | C0Z19_10495 | Not Available | Negative | 2309054 - 2309506 | 16476.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
