Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | C0Z19_10300 | Not Available | Negative | 2261630 - 2262016 | 13727.4 |
| duf305 domain-containing protein | C0Z19_10305 | Not Available | Positive | 2262399 - 2262830 | 15168.1 |
| mfs transporter | C0Z19_10310 | Not Available | Positive | 2263221 - 2264444 | 42549.7 |
| plp-dependent aminotransferase family protein | C0Z19_10315 | Not Available | Positive | 2264626 - 2266059 | 51544.3 |
| cupin | C0Z19_10320 | Not Available | Positive | 2266224 - 2266625 | 15109.9 |
| methyl-accepting chemotaxis protein | C0Z19_10325 | Not Available | Positive | 2266782 - 2268338 | 54120.5 |
| pyrimidine utilization transport protein g | C0Z19_10330 | Not Available | Positive | 2268583 - 2269890 | 45091.7 |
| diguanylate phosphodiesterase | C0Z19_10335 | Not Available | Positive | 2270192 - 2271472 | 47958.8 |
| branched chain amino acid abc transporter substrate-binding protein | C0Z19_10340 | Not Available | Positive | 2271717 - 2272922 | 42409.8 |
| pyruvate ferredoxin oxidoreductase | C0Z19_10345 | Not Available | Negative | 2272987 - 2276607 | 130319.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
