Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C0Z19_10095 | Not Available | Negative | 2211112 - 2212125 | 37044.7 |
| hypothetical protein | C0Z19_10100 | Not Available | Negative | 2212144 - 2212782 | 23376.6 |
| hypothetical protein | C0Z19_10105 | Not Available | Negative | 2213222 - 2214622 | 53238.4 |
| integrase | C0Z19_10110 | Not Available | Negative | 2214724 - 2215869 | 42927.3 |
| short chain dehydrogenase | C0Z19_10115 | Not Available | Positive | 2216056 - 2216889 | 28870.7 |
| diguanylate cyclase | C0Z19_10120 | Not Available | Positive | 2216957 - 2217355 | 15071.2 |
| trna 2-thiocytidine(32) synthetase ttca | C0Z19_10125 | Not Available | Positive | 2217355 - 2218395 | 37780.4 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | C0Z19_10130 | Not Available | Positive | 2218530 - 2219891 | 47843.3 |
| hypothetical protein | C0Z19_10135 | Not Available | Negative | 2219861 - 2220055 | 7373.21 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | C0Z19_10140 | Not Available | Positive | 2220018 - 2221835 | 65809.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
