Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C0Z19_09945 | Not Available | Negative | 2181352 - 2182104 | 26449.5 |
| allophanate hydrolase | C0Z19_09950 | Not Available | Negative | 2182125 - 2183183 | 37837.6 |
| allophanate hydrolase | C0Z19_09955 | Not Available | Negative | 2183183 - 2183833 | 23143.7 |
| transcriptional regulator | C0Z19_09960 | Not Available | Positive | 2183990 - 2184502 | 18773.6 |
| 5-formyltetrahydrofolate cyclo-ligase | C0Z19_09965 | Not Available | Negative | 2184591 - 2185199 | 21912.1 |
| lytic transglycosylase | C0Z19_09970 | Not Available | Positive | 2185220 - 2187205 | 73121.8 |
| nad-dependent dehydratase | C0Z19_09975 | Not Available | Positive | 2187317 - 2188273 | 34116.3 |
| glutathione s-transferase | C0Z19_09980 | Not Available | Positive | 2188318 - 2188968 | 23672.2 |
| multifunctional cca addition/repair protein | C0Z19_09985 | Not Available | Positive | 2188965 - 2190212 | 45949.2 |
| hypothetical protein | C0Z19_09990 | Not Available | Negative | 2190360 - 2191592 | 44000.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
