Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein hydrolase transporter lrga | C0Z19_09845 | Not Available | Positive | 2158045 - 2158497 | 15724.8 |
| murein hydrolase effector protein lrgb | C0Z19_09850 | Not Available | Positive | 2158543 - 2159271 | 25803.5 |
| adenosylhomocysteinase | C0Z19_09855 | Not Available | Positive | 2159559 - 2160977 | 52307.5 |
| hypothetical protein | C0Z19_09860 | Not Available | Positive | 2161215 - 2161568 | 12740.4 |
| methylenetetrahydrofolate reductase | C0Z19_09865 | Not Available | Positive | 2161618 - 2162445 | 30414.5 |
| gamma-glutamyltransferase | C0Z19_09870 | Not Available | Negative | 2162545 - 2164323 | 62409.4 |
| rpir family transcriptional regulator | C0Z19_09875 | Not Available | Negative | 2164372 - 2165232 | 31064.1 |
| abc transporter substrate-binding protein | C0Z19_09880 | Not Available | Positive | 2165495 - 2167135 | 60837.4 |
| abc transporter substrate-binding protein | C0Z19_09885 | Not Available | Positive | 2167491 - 2169128 | 60922.8 |
| peptide abc transporter permease | C0Z19_09890 | Not Available | Positive | 2169317 - 2170327 | 36569.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
