Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | C0Z19_09435 | Not Available | Negative | 2076736 - 2078133 | 49778.6 |
| udp-n-acetylmuramate--alanine ligase | C0Z19_09440 | Not Available | Positive | 2078320 - 2078976 | 24283.5 |
| redoxin | C0Z19_09445 | Not Available | Positive | 2079029 - 2079613 | 20291.4 |
| type ii 3-dehydroquinate dehydratase | C0Z19_09450 | Not Available | Positive | 2079809 - 2080264 | 16771.1 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | C0Z19_09455 | Not Available | Positive | 2080329 - 2080802 | 16251.5 |
| acetyl-coa carboxylase biotin carboxylase subunit | C0Z19_09460 | Not Available | Positive | 2080927 - 2082294 | 50253.6 |
| 50s ribosomal protein l11 methyltransferase | C0Z19_09465 | Not Available | Positive | 2082300 - 2083253 | 33840.2 |
| hypothetical protein | C0Z19_09475 | Not Available | Positive | 2084034 - 2084948 | 33679.7 |
| thiol peroxidase | C0Z19_09480 | Not Available | Positive | 2085026 - 2085526 | 17439.8 |
| carbohydrate kinase family protein | C0Z19_09485 | Not Available | Positive | 2085621 - 2086556 | 33831.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
