Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | C0Z19_09385 | Not Available | Negative | 2066537 - 2067538 | 35563.8 |
| short-chain dehydrogenase | C0Z19_09390 | Not Available | Negative | 2067669 - 2068448 | 27526.8 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | C0Z19_09395 | Not Available | Negative | 2068445 - 2069125 | 23689.7 |
| 2-dehydro-3-deoxygalactonokinase | C0Z19_09400 | Not Available | Negative | 2069237 - 2070229 | 34329.4 |
| iclr family transcriptional regulator | C0Z19_09405 | Not Available | Negative | 2070226 - 2071143 | 32995.8 |
| cupin | C0Z19_09410 | Not Available | Positive | 2071468 - 2071983 | 18282.9 |
| monofunctional biosynthetic peptidoglycan transglycosylase | C0Z19_09415 | Not Available | Negative | 2072152 - 2072874 | 27394.0 |
| shikimate dehydrogenase | C0Z19_09420 | Not Available | Negative | 2072941 - 2073843 | 30969.1 |
| ribonuclease ii | C0Z19_09425 | Not Available | Negative | 2073840 - 2076011 | 77913.1 |
| esterase | C0Z19_09430 | Not Available | Negative | 2076146 - 2076739 | 21368.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
