Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent malic enzyme | C0Z19_09335 | Not Available | Negative | 2055294 - 2057600 | 83129.1 |
| thiamine-phosphate kinase | C0Z19_09340 | Not Available | Positive | 2057778 - 2058779 | 35781.6 |
| phosphatidylglycerophosphatase a | C0Z19_09345 | Not Available | Positive | 2058883 - 2059341 | 16907.2 |
| damage-inducible protein cina | C0Z19_09350 | Not Available | Positive | 2059411 - 2059911 | 17682.1 |
| orotidine-5'-phosphate decarboxylase | C0Z19_09355 | Not Available | Negative | 2059942 - 2060763 | 29314.8 |
| aldose 1-epimerase | C0Z19_09360 | Not Available | Negative | 2060876 - 2061952 | 38549.8 |
| gluconolaconase | C0Z19_09365 | Not Available | Negative | 2062081 - 2062977 | 32219.0 |
| 3-oxoacyl-acp reductase | C0Z19_09370 | Not Available | Negative | 2062974 - 2063762 | 27431.9 |
| l-arabinose abc transporter permease arah | C0Z19_09375 | Not Available | Negative | 2063836 - 2064852 | 35617.1 |
| l-arabinose abc transporter atp-binding protein arag | C0Z19_09380 | Not Available | Negative | 2064931 - 2066454 | 55569.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
