Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor protein mota | C0Z19_09285 | Not Available | Negative | 2045398 - 2046180 | 27587.5 |
| 4-hydroxy-tetrahydrodipicolinate reductase | C0Z19_09290 | Not Available | Negative | 2046256 - 2047062 | 28257.9 |
| outer membrane protein assembly factor bame | C0Z19_09295 | Not Available | Negative | 2047210 - 2048022 | 27640.1 |
| ferric iron uptake transcriptional regulator | C0Z19_09300 | Not Available | Positive | 2048149 - 2048577 | 16261.4 |
| type i glyceraldehyde-3-phosphate dehydrogenase | C0Z19_09305 | Not Available | Negative | 2048687 - 2049697 | 35881.8 |
| transketolase | C0Z19_09310 | Not Available | Negative | 2049843 - 2051864 | 72053.4 |
| polyamine aminopropyltransferase | C0Z19_09315 | Not Available | Positive | 2052147 - 2052980 | 30326.8 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | C0Z19_09320 | Not Available | Positive | 2053048 - 2053788 | 25847.1 |
| barnase inhibitor | C0Z19_09325 | Not Available | Negative | 2053874 - 2054443 | 21315.3 |
| ribonuclease | C0Z19_09330 | Not Available | Negative | 2054451 - 2054906 | 16289.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
