Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease dsdx | C0Z19_09235 | Not Available | Negative | 2033346 - 2034713 | 47759.9 |
| 2-dehydro-3-deoxyphosphogluconate aldolase | C0Z19_09240 | Not Available | Negative | 2034817 - 2035452 | 22048.9 |
| phosphogluconate dehydratase | C0Z19_09245 | Not Available | Negative | 2035463 - 2037337 | 66121.7 |
| transcriptional regulator | C0Z19_09250 | Not Available | Positive | 2037612 - 2038475 | 30603.9 |
| hypothetical protein | C0Z19_09255 | Not Available | Negative | 2038472 - 2038894 | 15939.2 |
| glutamate-5-semialdehyde dehydrogenase | C0Z19_09260 | Not Available | Negative | 2038971 - 2040260 | 45864.2 |
| dna polymerase iii subunit delta | C0Z19_09265 | Not Available | Negative | 2040343 - 2041431 | 39251.6 |
| lipopolysaccharide-assembly family protein | C0Z19_09270 | Not Available | Negative | 2041475 - 2042026 | 19618.8 |
| leucine--trna ligase | C0Z19_09275 | Not Available | Negative | 2042100 - 2044694 | 97043.3 |
| biopolymer transporter exbd | C0Z19_09280 | Not Available | Negative | 2044879 - 2045361 | 16784.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
