Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | C0Z19_09130 | Not Available | Positive | 2013114 - 2014181 | 39049.9 |
| histidine kinase | C0Z19_09135 | Not Available | Positive | 2014253 - 2015191 | 34057.2 |
| histidine phosphatase family protein | C0Z19_09140 | Not Available | Negative | 2015305 - 2015979 | 24357.7 |
| d-tyrosyl-trna(tyr) deacylase | C0Z19_09145 | Not Available | Negative | 2016011 - 2016469 | 15878.1 |
| tyrosine--trna ligase | C0Z19_09150 | Not Available | Negative | 2016552 - 2017799 | 46026.2 |
| anhydro-n-acetylmuramic acid kinase | C0Z19_09155 | Not Available | Positive | 2017992 - 2019209 | 42584.6 |
| iron-sulfur cluster insertion protein erpa | C0Z19_09160 | Not Available | Negative | 2019303 - 2019671 | 13125.3 |
| 30s ribosomal protein s9 | C0Z19_09165 | Not Available | Negative | 2019955 - 2020347 | 14365.4 |
| 50s ribosomal protein l13 | C0Z19_09170 | Not Available | Negative | 2020359 - 2020787 | 15921.4 |
| osmc family protein | C0Z19_09175 | Not Available | Positive | 2021384 - 2021806 | 14980.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
