Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-octaprenyl-6-methoxyphenyl hydroxylase | C0Z19_09080 | Not Available | Positive | 2004182 - 2005507 | 46893.3 |
| trna dihydrouridine synthase dusb | C0Z19_09085 | Not Available | Positive | 2005675 - 2006736 | 38294.9 |
| fis family transcriptional regulator | C0Z19_09090 | Not Available | Positive | 2006733 - 2006966 | 8707.53 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase | C0Z19_09095 | Not Available | Positive | 2007007 - 2008572 | 55860.8 |
| hypothetical protein | C0Z19_09100 | Not Available | Positive | 2008801 - 2009589 | 28501.9 |
| alanine racemase | C0Z19_09105 | Not Available | Positive | 2009704 - 2010750 | 36960.0 |
| hypothetical protein | C0Z19_09110 | Not Available | Negative | 2010804 - 2011241 | 15652.0 |
| crossover junction endodeoxyribonuclease ruvc | C0Z19_09115 | Not Available | Positive | 2011482 - 2012024 | 18680.9 |
| hypothetical protein | C0Z19_09120 | Not Available | Positive | 2012219 - 2012500 | 10327.9 |
| holliday junction branch migration protein ruva | C0Z19_09125 | Not Available | Positive | 2012497 - 2013078 | 20287.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
