Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | C0Z19_08980 | Not Available | Negative | 1984602 - 1985879 | 44885.9 |
| polyisoprenoid-binding protein | C0Z19_08985 | Not Available | Negative | 1986228 - 1986791 | 20500.2 |
| polyisoprenoid-binding protein | C0Z19_08990 | Not Available | Negative | 1986962 - 1987528 | 20010.6 |
| cytochrome b | C0Z19_08995 | Not Available | Negative | 1987647 - 1988213 | 21167.6 |
| paraquat-inducible protein a | C0Z19_09000 | Not Available | Positive | 1988490 - 1989167 | 24579.8 |
| paraquat-inducible membrane protein a | C0Z19_09005 | Not Available | Positive | 1989164 - 1989847 | 25108.2 |
| mammalian cell entry protein | C0Z19_09010 | Not Available | Positive | 1989844 - 1991502 | 59137.4 |
| hypothetical protein | C0Z19_09015 | Not Available | Positive | 1991499 - 1992221 | 24984.9 |
| rna methyltransferase | C0Z19_09020 | Not Available | Positive | 1992393 - 1993715 | 47704.9 |
| glyoxalase | C0Z19_09025 | Not Available | Positive | 1993875 - 1994282 | 14624.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
