Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssg | C0Z19_08675 | Not Available | Negative | 1910630 - 1911733 | 40895.9 |
| type vi secretion system baseplate subunit tssf | C0Z19_08680 | Not Available | Negative | 1911697 - 1913535 | 68571.1 |
| type vi secretion system baseplate subunit tsse | C0Z19_08685 | Not Available | Negative | 1913569 - 1914087 | 19394.2 |
| type vi secretion system tube protein hcp | C0Z19_08690 | Not Available | Negative | 1914178 - 1914681 | 18288.4 |
| type vi secretion system contractile sheath large subunit | C0Z19_08695 | Not Available | Negative | 1914757 - 1916244 | 54724.7 |
| type vi secretion system contractile sheath small subunit | C0Z19_08700 | Not Available | Negative | 1916263 - 1916793 | 19564.3 |
| hypothetical protein | C0Z19_08705 | Not Available | Negative | 1916831 - 1917487 | 22803.8 |
| type vi secretion system lipoprotein tssj | C0Z19_08710 | Not Available | Positive | 1917798 - 1918463 | 23688.7 |
| type vi secretion system baseplate subunit tssk | C0Z19_08715 | Not Available | Positive | 1918554 - 1919900 | 49810.8 |
| type vi secretion system protein impk | C0Z19_08720 | Not Available | Positive | 1919897 - 1920676 | 28607.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
