Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C0Z19_08625 | Not Available | Negative | 1896720 - 1897283 | 20092.6 |
| hypothetical protein | C0Z19_08630 | Not Available | Negative | 1897303 - 1897797 | 18078.7 |
| thiamine phosphate synthase | C0Z19_08635 | Not Available | Negative | 1898030 - 1898608 | 20708.3 |
| hypothetical protein | C0Z19_08640 | Not Available | Negative | 1898687 - 1899712 | 33603.1 |
| d-alanyl-d-alanine carboxypeptidase | C0Z19_08645 | Not Available | Positive | 1899838 - 1900701 | 31885.9 |
| type vi secretion system membrane subunit tssm | C0Z19_08650 | Not Available | Positive | 1900820 - 1904728 | 142026.0 |
| type vi secretion system-associated protein tagf | C0Z19_08655 | Not Available | Positive | 1904725 - 1905711 | 36347.5 |
| hypothetical protein | C0Z19_08660 | Not Available | Positive | 1905617 - 1906711 | 37827.7 |
| type vi secretion system protein tssa | C0Z19_08665 | Not Available | Negative | 1906776 - 1907891 | 40328.5 |
| type vi secretion system atpase tssh | C0Z19_08670 | Not Available | Negative | 1907893 - 1910571 | 97111.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
