Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | C0Z19_08220 | Not Available | Positive | 1800843 - 1801439 | 21764.8 |
| dna-binding response regulator | C0Z19_08225 | Not Available | Negative | 1801461 - 1802105 | 23224.3 |
| histidine kinase | C0Z19_08230 | Not Available | Negative | 1802102 - 1803532 | 52017.9 |
| hopanoid biosynthesis associated radical sam protein hpnh | C0Z19_08235 | Not Available | Negative | 1803664 - 1804815 | 42916.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | C0Z19_08240 | Not Available | Negative | 1804826 - 1805770 | 33915.5 |
| glycosyl transferase family 2 | C0Z19_08245 | Not Available | Positive | 1806095 - 1807258 | 41517.6 |
| hypothetical protein | C0Z19_08250 | Not Available | Negative | 1807286 - 1807774 | 17531.0 |
| nad-dependent dehydratase | C0Z19_08255 | Not Available | Negative | 1807890 - 1808900 | 36683.3 |
| diguanylate cyclase | C0Z19_08260 | Not Available | Negative | 1808979 - 1812152 | 117332.0 |
| acylphosphatase | C0Z19_08265 | Not Available | Positive | 1812304 - 1812600 | 11262.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
