Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein | C0Z19_08170 | Not Available | Positive | 1786737 - 1787360 | 22718.3 |
| diguanylate cyclase | C0Z19_08175 | Not Available | Positive | 1787369 - 1788298 | 34884.8 |
| squalene synthase hpnd | C0Z19_08180 | Not Available | Positive | 1788540 - 1789394 | 31145.3 |
| squalene--hopene cyclase | C0Z19_08185 | Not Available | Positive | 1789534 - 1791528 | 73362.4 |
| hypothetical protein | C0Z19_08190 | Not Available | Positive | 1791528 - 1792226 | 23483.7 |
| hypothetical protein | C0Z19_08195 | Not Available | Negative | 1792354 - 1792617 | 8817.32 |
| type vi secretion system tip protein vgrg | C0Z19_08200 | Not Available | Negative | 1792821 - 1795886 | 108912.0 |
| sulfite exporter taue/safe family protein | C0Z19_08205 | Not Available | Negative | 1796227 - 1797021 | 27211.0 |
| abc transporter | C0Z19_08210 | Not Available | Negative | 1797042 - 1797890 | 29580.0 |
| rnd transporter | C0Z19_08215 | Not Available | Negative | 1797883 - 1800519 | 92242.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
