Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | C0Z19_07375 | Not Available | Positive | 1590965 - 1591360 | 14914.6 |
| duf480 domain-containing protein | C0Z19_07380 | Not Available | Negative | 1591397 - 1592077 | 24642.6 |
| threonine transporter | C0Z19_07385 | Not Available | Negative | 1592227 - 1592865 | 22691.2 |
| polyamine abc transporter permease | C0Z19_07390 | Not Available | Negative | 1592985 - 1593821 | 29673.2 |
| polyamine abc transporter substrate-binding protein | C0Z19_07395 | Not Available | Negative | 1593834 - 1595099 | 45992.8 |
| spermidine/putrescine abc transporter substrate-binding protein | C0Z19_07400 | Not Available | Negative | 1595255 - 1596316 | 38511.7 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | C0Z19_07405 | Not Available | Negative | 1596423 - 1597517 | 40231.7 |
| dna-binding protein | C0Z19_07410 | Not Available | Positive | 1597635 - 1599164 | 56049.2 |
| hypothetical protein | C0Z19_07415 | Not Available | Positive | 1599198 - 1599518 | 11330.8 |
| lipase chaperone | C0Z19_07420 | Not Available | Negative | 1599617 - 1600684 | 38408.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
