Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | C0Z19_07275 | Not Available | Positive | 1573441 - 1574322 | 31556.7 |
| Trna-gln | Not Available | Not Available | Positive | 1574376 - 1574452 | Not Available |
| ribose-phosphate pyrophosphokinase | C0Z19_07285 | Not Available | Positive | 1574492 - 1575448 | 34403.9 |
| 50s ribosomal protein l25 | C0Z19_07290 | Not Available | Positive | 1575630 - 1576241 | 21790.1 |
| aminoacyl-trna hydrolase | C0Z19_07295 | Not Available | Positive | 1576375 - 1576977 | 21868.4 |
| ferredoxin | C0Z19_07300 | Not Available | Negative | 1577100 - 1577369 | 9690.53 |
| pantetheine-phosphate adenylyltransferase | C0Z19_07305 | Not Available | Negative | 1577510 - 1578016 | 19022.9 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | C0Z19_07310 | Not Available | Negative | 1578128 - 1578754 | 22641.0 |
| hypothetical protein | C0Z19_07315 | Not Available | Positive | 1578793 - 1579197 | 13459.7 |
| succinate dehydrogenase, cytochrome b556 subunit | C0Z19_07320 | Not Available | Negative | 1579255 - 1579492 | 8890.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
