Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase factor sigma-54 | C0Z19_07225 | Not Available | Positive | 1563248 - 1564759 | 54959.0 |
| ribosomal subunit interface protein | C0Z19_07230 | Not Available | Positive | 1564929 - 1565288 | 13653.4 |
| pts iia-like nitrogen-regulatory protein ptsn | C0Z19_07235 | Not Available | Positive | 1565556 - 1566011 | 16986.6 |
| hpr kinase/phosphorylase | C0Z19_07240 | Not Available | Positive | 1566148 - 1567116 | 35218.0 |
| rnase adapter rapz | C0Z19_07245 | Not Available | Positive | 1567230 - 1568129 | 33576.1 |
| atp-dependent protease | C0Z19_07250 | Not Available | Positive | 1568183 - 1568818 | 23516.5 |
| a/g-specific adenine glycosylase | C0Z19_07255 | Not Available | Negative | 1568880 - 1569992 | 40362.6 |
| formamidopyrimidine-dna glycosylase | C0Z19_07260 | Not Available | Negative | 1570006 - 1570833 | 30791.1 |
| hypothetical protein | C0Z19_07265 | Not Available | Positive | 1570932 - 1572770 | 67176.8 |
| lipoprotein localization factor lolb | C0Z19_07270 | Not Available | Positive | 1572770 - 1573396 | 22413.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
