Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | C0Z19_07175 | Not Available | Negative | 1554171 - 1555040 | 32306.8 |
| duf4743 domain-containing protein | C0Z19_07180 | Not Available | Negative | 1555080 - 1555934 | 31457.3 |
| lysine transporter lyse | C0Z19_07185 | Not Available | Negative | 1556005 - 1556619 | 21623.1 |
| adenine phosphoribosyltransferase | C0Z19_07190 | Not Available | Negative | 1556631 - 1557197 | 20470.0 |
| potassium transporter | C0Z19_07195 | Not Available | Negative | 1557311 - 1559320 | 71916.5 |
| kpsf/gutq family sugar-phosphate isomerase | C0Z19_07200 | Not Available | Positive | 1559479 - 1560462 | 34907.4 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | C0Z19_07205 | Not Available | Positive | 1560462 - 1561010 | 19340.2 |
| lps export abc transporter periplasmic protein lptc | C0Z19_07210 | Not Available | Positive | 1561007 - 1561621 | 21547.2 |
| lipopolysaccharide transport periplasmic protein lpta | C0Z19_07215 | Not Available | Positive | 1561650 - 1562309 | 23392.6 |
| lps export abc transporter atp-binding protein | C0Z19_07220 | Not Available | Positive | 1562306 - 1563112 | 29114.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
