Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps-assembly protein lptd | C0Z19_06920 | Not Available | Negative | 1491471 - 1493834 | 86232.7 |
| aminoglycoside phosphotransferase | C0Z19_06925 | Not Available | Positive | 1494061 - 1495095 | 39194.8 |
| mannose-1-phosphate guanylyltransferase | C0Z19_06930 | Not Available | Positive | 1495113 - 1495844 | 26107.2 |
| metal abc transporter permease | C0Z19_06935 | Not Available | Negative | 1495969 - 1497858 | 69338.0 |
| acyl-coa thioesterase | C0Z19_06940 | Not Available | Positive | 1498067 - 1498465 | 14365.4 |
| diguanylate cyclase | C0Z19_06945 | Not Available | Negative | 1498550 - 1501750 | 117455.0 |
| hypothetical protein | C0Z19_06950 | Not Available | Negative | 1502009 - 1502485 | 18041.4 |
| sulfurtransferase fdhd | C0Z19_06955 | Not Available | Positive | 1502641 - 1503471 | 29698.5 |
| enoyl-coa hydratase | C0Z19_06960 | Not Available | Negative | 1503837 - 1504604 | 27499.5 |
| acetyl-coa c-acyltransferase | C0Z19_06965 | Not Available | Negative | 1504691 - 1505890 | 41876.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
