Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| neamine aminotransferase btrb | C0Z19_06870 | Not Available | Negative | 1479069 - 1480325 | 45722.8 |
| hypothetical protein | C0Z19_06875 | Not Available | Negative | 1480327 - 1482168 | 67021.3 |
| hypothetical protein | C0Z19_06880 | Not Available | Negative | 1482165 - 1483379 | 43221.2 |
| gmc family oxidoreductase | C0Z19_06885 | Not Available | Positive | 1483674 - 1485299 | 58317.3 |
| hypothetical protein | C0Z19_06890 | Not Available | Positive | 1485313 - 1485561 | 9262.17 |
| hypothetical protein | C0Z19_06895 | Not Available | Positive | 1485530 - 1486885 | 49823.9 |
| phytanoyl-coa dioxygenase | C0Z19_06900 | Not Available | Positive | 1487060 - 1487950 | 32792.2 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | C0Z19_06905 | Not Available | Negative | 1488104 - 1488922 | 30488.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | C0Z19_06910 | Not Available | Negative | 1488996 - 1489997 | 34420.5 |
| molecular chaperone sura | C0Z19_06915 | Not Available | Negative | 1490009 - 1491436 | 51122.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
