Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonylcarbamoyl-amp synthase | C0Z19_06315 | Not Available | Negative | 1352130 - 1353170 | 36073.8 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | C0Z19_06320 | Not Available | Negative | 1353205 - 1354413 | 42200.7 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | C0Z19_06325 | Not Available | Negative | 1354534 - 1355055 | 18053.9 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | C0Z19_06330 | Not Available | Negative | 1355086 - 1355976 | 32732.0 |
| fructose-bisphosphate aldolase class ii | C0Z19_06335 | Not Available | Negative | 1356200 - 1357264 | 38501.3 |
| pyruvate kinase | C0Z19_06340 | Not Available | Negative | 1357419 - 1358855 | 51429.4 |
| phosphoglycerate kinase | C0Z19_06345 | Not Available | Negative | 1359212 - 1360411 | 41347.8 |
| branched-chain amino acid transporter | C0Z19_06350 | Not Available | Negative | 1360649 - 1360972 | 11649.6 |
| branched-chain amino acid abc transporter permease | C0Z19_06355 | Not Available | Negative | 1360976 - 1361746 | 27368.1 |
| branched chain amino acid aminotransferase | C0Z19_06360 | Not Available | Positive | 1361927 - 1362850 | 34053.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
