Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia soli |
| Strain | GP25-8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Nicotiana tabacum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1132447 bp
Thymine Count
1126675 bp
Guanine Count
1902158 bp
Cytosine Count
1934929 bp
Genome Length
6096209 bp
Protein-coding Genes
5327 genes
Non-Coding Genes
96 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | C0Z19_00165 | Not Available | Positive | 39173 - 40651 | 52034.2 |
| haloacid dehalogenase type ii | C0Z19_00170 | Not Available | Positive | 40871 - 41539 | 25303.2 |
| fad-dependent oxidoreductase | C0Z19_00175 | Not Available | Positive | 41610 - 42887 | 46241.3 |
| abc transporter substrate-binding protein | C0Z19_00180 | Not Available | Positive | 43029 - 44648 | 58137.5 |
| abc transporter permease | C0Z19_00185 | Not Available | Positive | 44723 - 45679 | 34077.9 |
| dna-directed rna polymerase subunit alpha | C0Z19_00190 | Not Available | Positive | 45676 - 46590 | 32501.3 |
| abc transporter | C0Z19_00195 | Not Available | Positive | 46587 - 48428 | 64874.4 |
| nad(fad)-dependent dehydrogenase | C0Z19_00200 | Not Available | Positive | 48425 - 48739 | 11129.4 |
| fad/nad(p)-binding oxidoreductase | C0Z19_00205 | Not Available | Positive | 48724 - 50094 | 48587.7 |
| sarcosine oxidase subunit beta | C0Z19_00210 | Not Available | Positive | 50091 - 51254 | 41350.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
