Escherichia coli 53638

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli 53638 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is classified as a facultative anaerobe, allowing it to thrive in both oxygen-rich and oxygen-poor environments. E. coli 53638 demonstrates optimal growth at a temperature of 37.0°C, which corresponds to the average body temperature of warm-blooded hosts. This strain's habitat is primarily host-associated, indicating its prevalence in biological systems, particularly within the intestines of mammals. The ability to adapt to varying oxygen levels suggests that E. coli 53638 could play a versatile role in the microbial ecosystem, potentially contributing to processes such as fermentation and nutrient cycling within its host. Moreover, the specific pairing and single-cell arrangement may influence its interactions with other microbial species and its host, possibly affecting its ecological niche or its role in symbiotic relationships. Understanding the growth conditions and cellular arrangement of E. coli 53638 can provide insights into its functional capacities and interactions within the microbiome, illuminating its potential contributions to host health and microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strain53638

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli 53638
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli 53638 plasmid p53638_226, complete sequence.

Gene Summary

Adenine Count

57891 bp

Thymine Count

58702 bp

Guanine Count

53818 bp

Cytosine Count

55272 bp

Genome Length

225683 bp

Protein-coding Genes

281 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv conjugative transfer system coupling protein tradEC53638_RS27240Not AvailablePositive121 - 236485185.6
type ii toxin-antitoxin system trna(fmet)-specific endonuclease vapcEC53638_RS27245Not AvailableNegative2373 - 277114846.0
toxin-antitoxin system antitoxin vapbEC53638_RS27250Not AvailableNegative2771 - 29988536.05
conjugative transfer relaxase/helicase traiEC53638_RS27255Not AvailablePositive3080 - 8350191772.0
conjugal transfer pilus acetylase traxEC53638_RS27260Not AvailablePositive8370 - 911627287.6
fertility inhibition protein finoEC53638_RS27265Not AvailablePositive9171 - 973120988.6
anr family transcriptional regulatorEC53638_RS27270Not AvailablePositive9866 - 100788229.74
thermonuclease family proteinEC53638_RS27275Not AvailablePositive10323 - 1078417809.6
hypothetical proteinEC53638_RS27280Not AvailablePositive10830 - 109283977.83
is1 family transposaseEC53638_RS27295Not AvailablePositive10983 - 1168026631.4

Displaying genes 1 – 10 of 377 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.