Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid asymmetry maintenance abc transporter permease subunit mlae | PS417_RS23405 | Not Available | Positive | 977169 - 977966 | 28300.1 |
| outer membrane lipid asymmetry maintenance protein mlad | PS417_RS23400 | Not Available | Positive | 977966 - 978433 | 16372.0 |
| phospholipid-binding protein mlac | PS417_RS23395 | Not Available | Positive | 978445 - 979095 | 23639.1 |
| lipid asymmetry maintenance protein mlab | PS417_RS23390 | Not Available | Positive | 979092 - 979397 | 10645.0 |
| bola family protein | PS417_RS23385 | Not Available | Positive | 979512 - 979751 | 8878.58 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | PS417_RS23380 | Not Available | Positive | 979775 - 981040 | 45008.0 |
| atp phosphoribosyltransferase | PS417_RS23370 | Not Available | Positive | 981254 - 981889 | 23128.4 |
| histidinol dehydrogenase | PS417_RS23365 | Not Available | Positive | 982018 - 983340 | 47129.1 |
| histidinol-phosphate transaminase | PS417_RS23360 | Not Available | Positive | 983344 - 984396 | 38611.1 |
| uracil-xanthine permease family protein | PS417_RS23355 | Not Available | Negative | 984521 - 985795 | 44221.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
