Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative mismatch repair protein | PS417_RS22120 | Not Available | Negative | 1276815 - 1279406 | 95532.9 |
| Hypothetical protein | PS417_RS22115 | Not Available | Negative | 1279576 - 1279947 | 13481.0 |
| Hypothetical protein | PS417_RS22110 | Not Available | Negative | 1279940 - 1280428 | 18566.2 |
| Putative cro/ci transcriptional regulator | PS417_RS22105 | Not Available | Positive | 1280696 - 1281430 | 27612.6 |
| hypothetical protein | PS417_RS29185 | Not Available | Positive | 1281580 - 1281777 | 7328.27 |
| phage holin family protein | PS417_RS22100 | Not Available | Positive | 1282028 - 1282372 | 12177.0 |
| Putative phage-related protein | PS417_RS22095 | Not Available | Positive | 1282394 - 1282909 | 18423.8 |
| Putative baseplate assembly protein v | PS417_RS22090 | Not Available | Positive | 1282913 - 1283524 | 21631.5 |
| Putative baseplate assembly protein | PS417_RS22085 | Not Available | Positive | 1283534 - 1283866 | 12152.6 |
| Baseplate assembly protein | PS417_RS22080 | Not Available | Positive | 1283863 - 1284858 | 36081.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
