Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-nitrogen hydrolase family protein | PS417_RS23505 | Not Available | Positive | 960723 - 961571 | 30588.4 |
| metalloprotease tldd | PS417_RS23500 | Not Available | Positive | 961588 - 963030 | 50156.6 |
| ribosome biogenesis factor yjga | PS417_RS23495 | Not Available | Negative | 963076 - 963597 | 20195.1 |
| metalloprotease pmba | PS417_RS23490 | Not Available | Positive | 963706 - 965052 | 47911.7 |
| hypothetical protein | PS417_RS23485 | Not Available | Positive | 965203 - 965598 | 15331.2 |
| class ii fumarate hydratase | PS417_RS23480 | Not Available | Positive | 965591 - 966967 | 48759.1 |
| hypothetical protein | PS417_RS23475 | Not Available | Positive | 966995 - 967423 | 16123.1 |
| superoxide dismutase | PS417_RS23470 | Not Available | Positive | 967425 - 968036 | 22400.4 |
| zip family metal transporter | PS417_RS23465 | Not Available | Positive | 968070 - 968963 | 30191.1 |
| hpr family phosphocarrier protein | PS417_RS23460 | Not Available | Negative | 969052 - 969324 | 9664.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
