Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septal ring lytic transglycosylase rlpa family protein | PS417_RS23555 | Not Available | Negative | 947889 - 948260 | 13186.8 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | PS417_RS23550 | Not Available | Negative | 948418 - 949863 | 52890.3 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | PS417_RS23545 | Not Available | Negative | 949874 - 951325 | 51734.4 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | PS417_RS23540 | Not Available | Negative | 951342 - 951629 | 10222.1 |
| rod shape-determining protein mreb | PS417_RS23535 | Not Available | Positive | 951840 - 952877 | 37005.8 |
| rod shape-determining protein mrec | PS417_RS23530 | Not Available | Positive | 953018 - 954118 | 39205.6 |
| rod shape-determining protein mred | PS417_RS23525 | Not Available | Positive | 954118 - 954606 | 18409.6 |
| maf family protein | PS417_RS23520 | Not Available | Positive | 954658 - 955254 | 20794.8 |
| ribonuclease g | PS417_RS23515 | Not Available | Positive | 955325 - 956782 | 54469.9 |
| yhdp family protein | PS417_RS23510 | Not Available | Positive | 956859 - 960674 | 138674.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
