Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr/gntr family transcriptional regulator | PS417_RS23605 | Not Available | Positive | 937349 - 938098 | 27521.6 |
| hypothetical protein | PS417_RS23600 | Not Available | Negative | 938109 - 938294 | 6907.13 |
| phosphatidylcholine-hydrolyzing phospholipase c | PS417_RS23595 | Not Available | Negative | 938447 - 939604 | 42114.7 |
| 5-dehydro-4-deoxyglucarate dehydratase | PS417_RS23590 | Not Available | Positive | 939839 - 940750 | 32670.3 |
| aldehyde dehydrogenase family protein | PS417_RS23585 | Not Available | Positive | 940805 - 942250 | 51132.0 |
| mfs transporter | PS417_RS23580 | Not Available | Positive | 942350 - 943714 | 49368.0 |
| galactarate dehydratase | PS417_RS23575 | Not Available | Positive | 943726 - 945279 | 56214.0 |
| aec family transporter | PS417_RS23570 | Not Available | Positive | 945469 - 946410 | 32951.3 |
| carboxymuconolactone decarboxylase family protein | PS417_RS23565 | Not Available | Negative | 946407 - 946787 | 13908.7 |
| calcium/sodium antiporter | PS417_RS23560 | Not Available | Negative | 946784 - 947830 | 36781.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
