Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glxa family transcriptional regulator | PS417_RS23655 | Not Available | Negative | 928626 - 929546 | 34928.4 |
| acyl-coa dehydrogenase family protein | PS417_RS23650 | Not Available | Positive | 929767 - 930903 | 41889.6 |
| nadp(h)-dependent aldo-keto reductase | PS417_RS23645 | Not Available | Negative | 931016 - 932056 | 38631.5 |
| 50s ribosomal protein l13 | PS417_RS23640 | Not Available | Positive | 932305 - 932733 | 15706.0 |
| 30s ribosomal protein s9 | PS417_RS23635 | Not Available | Positive | 932748 - 933140 | 14602.7 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | PS417_RS23630 | Not Available | Positive | 933407 - 934000 | 21116.3 |
| cytochrome b | PS417_RS23625 | Not Available | Positive | 934000 - 935211 | 46045.1 |
| cytochrome c1 | PS417_RS23620 | Not Available | Positive | 935211 - 935990 | 29077.3 |
| glutathione s-transferase n-terminal domain-containing protein | PS417_RS23615 | Not Available | Positive | 936136 - 936753 | 23347.4 |
| clpxp protease specificity-enhancing factor | PS417_RS23610 | Not Available | Positive | 936771 - 937190 | 15202.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
