Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | PS417_RS23705 | Not Available | Negative | 916371 - 917999 | 60394.8 |
| abc transporter substrate-binding protein | PS417_RS23700 | Not Available | Negative | 918258 - 919859 | 59457.4 |
| simpl domain-containing protein | PS417_RS23695 | Not Available | Negative | 919950 - 920663 | 25555.5 |
| atp-binding protein | PS417_RS23690 | Not Available | Positive | 920869 - 922131 | 46533.5 |
| response regulator transcription factor | PS417_RS23685 | Not Available | Positive | 922124 - 922684 | 20606.8 |
| abc transporter atp-binding protein/permease | PS417_RS23680 | Not Available | Positive | 922796 - 924520 | 65280.4 |
| yhcb family protein | PS417_RS23675 | Not Available | Negative | 924709 - 925146 | 16342.4 |
| alpha/beta hydrolase | PS417_RS23670 | Not Available | Positive | 925294 - 925923 | 22642.3 |
| tryptophan--trna ligase | PS417_RS23665 | Not Available | Positive | 925948 - 927303 | 49306.6 |
| cell division protein zape | PS417_RS23660 | Not Available | Positive | 927383 - 928477 | 42062.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
