Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 3 | PS417_RS23755 | Not Available | Positive | 904777 - 906360 | 59671.2 |
| hypothetical protein | PS417_RS23750 | Not Available | Positive | 906528 - 906773 | 8858.21 |
| hypothetical protein | PS417_RS23745 | Not Available | Positive | 906870 - 907124 | 8915.0 |
| peptide abc transporter atp-binding protein | PS417_RS23740 | Not Available | Negative | 907238 - 908209 | 35710.3 |
| abc transporter atp-binding protein | PS417_RS23735 | Not Available | Negative | 908209 - 909177 | 35047.0 |
| abc transporter permease subunit | PS417_RS23730 | Not Available | Negative | 909188 - 910099 | 32527.8 |
| abc transporter permease subunit | PS417_RS23725 | Not Available | Negative | 910110 - 911120 | 37049.4 |
| abc transporter substrate-binding protein | PS417_RS23720 | Not Available | Negative | 911197 - 912795 | 58857.2 |
| oprd family outer membrane porin | PS417_RS23715 | Not Available | Negative | 912876 - 914291 | 51712.7 |
| abc transporter substrate-binding protein | PS417_RS23710 | Not Available | Negative | 914462 - 916066 | 59602.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
