Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase d family protein | PS417_RS23805 | Not Available | Positive | 891073 - 892614 | 57843.3 |
| pepsy domain-containing protein | PS417_RS23800 | Not Available | Negative | 892714 - 895239 | 92423.7 |
| tonb-dependent receptor | PS417_RS23795 | Not Available | Negative | 895376 - 897661 | 82434.7 |
| fe2+-dependent dioxygenase | PS417_RS23790 | Not Available | Positive | 897866 - 898546 | 25386.2 |
| tetratricopeptide repeat protein | PS417_RS23785 | Not Available | Positive | 898549 - 899301 | 27420.7 |
| type iii plp-dependent enzyme | PS417_RS23780 | Not Available | Negative | 899351 - 900514 | 43440.0 |
| betaine/proline/choline family abc transporter atp-binding protein | PS417_RS23775 | Not Available | Negative | 900994 - 902151 | 43107.0 |
| abc transporter permease | PS417_RS23770 | Not Available | Negative | 902148 - 902801 | 22913.4 |
| glycine betaine abc transporter substrate-binding protein | PS417_RS23765 | Not Available | Negative | 902813 - 903709 | 33187.6 |
| abc transporter permease | PS417_RS23760 | Not Available | Negative | 903730 - 904446 | 24963.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
