Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1631 domain-containing protein | PS417_RS23855 | Not Available | Positive | 877230 - 879353 | 78860.1 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | PS417_RS23850 | Not Available | Positive | 879415 - 879978 | 20789.2 |
| regulatory signaling modulator protein ampe | PS417_RS23845 | Not Available | Positive | 879975 - 880811 | 30837.2 |
| methyl-accepting chemotaxis protein | PS417_RS23840 | Not Available | Positive | 880925 - 882955 | 72870.7 |
| hypothetical protein | PS417_RS23835 | Not Available | Positive | 883082 - 883513 | 16335.6 |
| tatd family hydrolase | PS417_RS23830 | Not Available | Negative | 883460 - 884236 | 29332.4 |
| catabolite repressor/activator | PS417_RS23825 | Not Available | Negative | 884239 - 885234 | 36410.8 |
| phosphoenolpyruvate--protein phosphotransferase | PS417_RS23820 | Not Available | Positive | 885528 - 888386 | 101471.0 |
| 1-phosphofructokinase | PS417_RS23815 | Not Available | Positive | 888387 - 889307 | 32077.3 |
| pts fructose-like transporter subunit iib | PS417_RS23810 | Not Available | Positive | 889319 - 891028 | 58866.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
