Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | PS417_RS17860 | Not Available | Positive | 2169031 - 2169627 | 21154.1 |
| Hypothetical protein | PS417_RS17855 | Not Available | Positive | 2169624 - 2170040 | 14715.5 |
| Tail constituent protein | PS417_RS17850 | Not Available | Positive | 2170113 - 2170769 | 22766.9 |
| Hypothetical protein | PS417_RS17845 | Not Available | Positive | 2170773 - 2171153 | 13841.3 |
| Hypothetical protein | PS417_RS17840 | Not Available | Positive | 2171201 - 2171473 | 10007.1 |
| Putative tail length tape-measure protein | PS417_RS17835 | Not Available | Positive | 2171501 - 2174587 | 107494.0 |
| Minor tail protein m | PS417_RS17830 | Not Available | Positive | 2174587 - 2174925 | 12679.1 |
| Minor tail protein l | PS417_RS17825 | Not Available | Positive | 2174937 - 2175689 | 27531.9 |
| Minor tail protein | PS417_RS17820 | Not Available | Positive | 2175692 - 2176456 | 28723.0 |
| hypothetical protein | PS417_RS17815 | Not Available | Negative | 2176669 - 2177286 | 22354.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
