Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | WCS417 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222714 bp
Thymine Count
1224473 bp
Guanine Count
1858679 bp
Cytosine Count
1862205 bp
Genome Length
6169071 bp
Protein-coding Genes
5543 genes
Non-Coding Genes
152 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PS417_RS23905 | Not Available | Positive | 870418 - 870633 | 8213.58 |
| dna gyrase inhibitor yacg | PS417_RS23900 | Not Available | Negative | 870630 - 870830 | 7333.61 |
| dephospho-coa kinase | PS417_RS23895 | Not Available | Negative | 870827 - 871450 | 23140.8 |
| prepilin peptidase | PS417_RS23890 | Not Available | Negative | 871447 - 872313 | 31644.7 |
| type ii secretion system f family protein | PS417_RS23885 | Not Available | Negative | 872310 - 873518 | 43344.4 |
| pilin | PS417_RS23880 | Not Available | Positive | 873712 - 874134 | 14252.3 |
| o-antigen ligase family protein | PS417_RS23875 | Not Available | Positive | 874170 - 875570 | 50925.5 |
| Trna-thr | Not Available | Not Available | Positive | 875619 - 875691 | Not Available |
| duf6388 family protein | PS417_RS23865 | Not Available | Positive | 875837 - 876142 | 11842.6 |
| carboxylating nicotinate-nucleotide diphosphorylase | PS417_RS23860 | Not Available | Negative | 876190 - 877038 | 30228.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
